Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CLDN20P56880 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN20P56880 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN20P56880 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN20P56880 NDUFS6P1-201ENST00000485187 316 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 GOLGA2P8-201ENST00000505201 779 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 AC019193.1-201ENST00000506678 823 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 NDUFB10P1-201ENST00000567319 521 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN20P56880 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.72□□□□□ -0.37
CLDN20P56880 AL133467.4-201ENST00000602953 725 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 BAP1-211ENST00000615113 489 ntBASIC12.72□□□□□ -0.37
CLDN20P56880 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CLDN20P56880 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN20P56880 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
CLDN20P56880 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN20P56880 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CLDN20P56880 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CLDN20P56880 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CLDN20P56880 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 BX679664.3-201ENST00000414070 555 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.71□□□□□ -0.37
CLDN20P56880 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN20P56880 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN20P56880 AC113935.1-201ENST00000471722 555 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN20P56880 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN20P56880 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN20P56880 RN7SL455P-201ENST00000580629 282 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN20P56880 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN20P56880 AC103810.10-201ENST00000606504 343 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 AC084346.2-201ENST00000607097 949 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms