Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.13□□□□□ -0.79
APOC4P55056 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
APOC4P55056 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 FUCA1P1-201ENST00000374476 1351 ntBASIC10.13□□□□□ -0.79
APOC4P55056 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOC4P55056 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
APOC4P55056 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
APOC4P55056 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 GGTLC4P-201ENST00000402176 664 ntBASIC10.12□□□□□ -0.79
APOC4P55056 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 GCSHP3-201ENST00000431120 391 ntBASIC10.12□□□□□ -0.79
APOC4P55056 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 PARP8-206ENST00000503665 572 ntTSL 4 BASIC10.12□□□□□ -0.79
APOC4P55056 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC10.12□□□□□ -0.79
APOC4P55056 MT3-202ENST00000561640 514 ntTSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC10.12□□□□□ -0.79
APOC4P55056 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 CSTP2-201ENST00000610599 398 ntBASIC10.12□□□□□ -0.79
APOC4P55056 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
APOC4P55056 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 SLC9A3P3-201ENST00000457608 2229 ntBASIC10.12□□□□□ -0.79
APOC4P55056 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.12□□□□□ -0.79
APOC4P55056 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.12□□□□□ -0.79
APOC4P55056 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.12□□□□□ -0.79
APOC4P55056 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
APOC4P55056 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOC4P55056 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
APOC4P55056 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 AC007191.1-201ENST00000623179 2995 ntBASIC10.11□□□□□ -0.79
APOC4P55056 CICP16-201ENST00000502609 2813 ntBASIC10.11□□□□□ -0.79
APOC4P55056 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
APOC4P55056 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 FMO6P-201ENST00000236166 1620 ntBASIC10.11□□□□□ -0.79
APOC4P55056 AC025183.3-201ENST00000623526 1482 ntBASIC10.11□□□□□ -0.79
APOC4P55056 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
APOC4P55056 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.11□□□□□ -0.79
APOC4P55056 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms