Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 AC003958.1-201ENST00000435883 421 ntBASIC14.39□□□□□ -0.11
MMP13P45452 RPSAP15-201ENST00000448168 861 ntBASIC14.39□□□□□ -0.11
MMP13P45452 AL353637.1-201ENST00000451571 732 ntBASIC14.39□□□□□ -0.11
MMP13P45452 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 AC008723.1-201ENST00000506922 207 ntBASIC14.39□□□□□ -0.11
MMP13P45452 AC005740.1-201ENST00000515639 522 ntBASIC14.39□□□□□ -0.11
MMP13P45452 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 PHBP15-201ENST00000574228 665 ntBASIC14.39□□□□□ -0.11
MMP13P45452 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP13P45452 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AL139099.5-201ENST00000635274 300 ntBASIC14.39□□□□□ -0.11
MMP13P45452 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP13P45452 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MMP13P45452 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP13P45452 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP13P45452 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 AC106818.1-201ENST00000623223 3242 ntBASIC14.38□□□□□ -0.11
MMP13P45452 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP13P45452 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MMP13P45452 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 BX679664.3-201ENST00000414070 555 ntBASIC14.38□□□□□ -0.11
MMP13P45452 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.38□□□□□ -0.11
MMP13P45452 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 AC113935.1-201ENST00000471722 555 ntBASIC14.38□□□□□ -0.11
MMP13P45452 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP13P45452 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 MIR3619-201ENST00000579667 83 ntBASIC14.38□□□□□ -0.11
MMP13P45452 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 AC020922.3-201ENST00000595064 547 ntBASIC14.38□□□□□ -0.11
MMP13P45452 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP13P45452 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.38□□□□□ -0.11
MMP13P45452 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.38□□□□□ -0.11
MMP13P45452 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
MMP13P45452 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 KRT18P9-201ENST00000604826 1300 ntBASIC14.38□□□□□ -0.11
MMP13P45452 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP13P45452 AC027369.3-201ENST00000530465 3707 ntBASIC14.38□□□□□ -0.11
MMP13P45452 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MMP13P45452 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MMP13P45452 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MMP13P45452 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 SNORA50C-201ENST00000408535 133 ntBASIC14.37□□□□□ -0.11
MMP13P45452 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP13P45452 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 AC073869.2-201ENST00000417338 1026 ntBASIC14.37□□□□□ -0.11
MMP13P45452 AC026320.2-201ENST00000434379 478 ntBASIC14.37□□□□□ -0.11
MMP13P45452 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP13P45452 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP13P45452 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms