Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MAGEA5-201ENST00000446757 942 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 RN7SL564P-201ENST00000496309 250 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 PRSS3P1-201ENST00000503996 742 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.49□□□□□ -0.41
APOBEC1P41238 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.49□□□□□ -0.41
APOBEC1P41238 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 AC087392.5-201ENST00000612517 489 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 AP001184.1-201ENST00000637936 376 ntBASIC12.49□□□□□ -0.41
APOBEC1P41238 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
APOBEC1P41238 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.49□□□□□ -0.41
APOBEC1P41238 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOBEC1P41238 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC005014.1-201ENST00000432006 2976 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 AC008040.5-201ENST00000599781 1781 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC020658.7-201ENST00000624274 2442 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.48□□□□□ -0.41
APOBEC1P41238 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC026316.1-201ENST00000398900 414 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
APOBEC1P41238 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.48□□□□□ -0.41
APOBEC1P41238 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.48□□□□□ -0.41
APOBEC1P41238 MRPL22P1-201ENST00000505398 616 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.48□□□□□ -0.41
APOBEC1P41238 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.48□□□□□ -0.41
APOBEC1P41238 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 AC103691.2-201ENST00000618824 433 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 MIR193BHG-211ENST00000641433 5365 ntBASIC12.48□□□□□ -0.41
APOBEC1P41238 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms