Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.97□□□□□ -0.17
XPAP23025 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 RN7SL555P-201ENST00000584742 339 ntBASIC13.97□□□□□ -0.17
XPAP23025 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 AC018635.2-201ENST00000608625 364 ntBASIC13.97□□□□□ -0.17
XPAP23025 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
XPAP23025 AC091769.1-201ENST00000619576 568 ntBASIC13.97□□□□□ -0.17
XPAP23025 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.97□□□□□ -0.17
XPAP23025 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.97□□□□□ -0.17
XPAP23025 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.97□□□□□ -0.17
XPAP23025 PES1P2-201ENST00000449745 1735 ntBASIC13.97□□□□□ -0.17
XPAP23025 AL359881.3-201ENST00000602640 1721 ntBASIC13.97□□□□□ -0.17
XPAP23025 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.97□□□□□ -0.17
XPAP23025 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
XPAP23025 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
XPAP23025 AGAP10P-201ENST00000454844 2418 ntBASIC13.96□□□□□ -0.17
XPAP23025 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.96□□□□□ -0.17
XPAP23025 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.96□□□□□ -0.17
XPAP23025 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC13.96□□□□□ -0.17
XPAP23025 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.96□□□□□ -0.17
XPAP23025 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.96□□□□□ -0.17
XPAP23025 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 AC011474.4-201ENST00000623523 2076 ntBASIC13.96□□□□□ -0.17
XPAP23025 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
XPAP23025 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.96□□□□□ -0.17
XPAP23025 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 DKKL1P1-201ENST00000400550 698 ntBASIC13.96□□□□□ -0.17
XPAP23025 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.96□□□□□ -0.17
XPAP23025 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.96□□□□□ -0.17
XPAP23025 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.96□□□□□ -0.17
XPAP23025 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.96□□□□□ -0.17
XPAP23025 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.96□□□□□ -0.17
XPAP23025 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XPAP23025 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.96□□□□□ -0.17
XPAP23025 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
XPAP23025 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
XPAP23025 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
XPAP23025 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
XPAP23025 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
XPAP23025 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.95□□□□□ -0.18
XPAP23025 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
XPAP23025 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.95□□□□□ -0.18
XPAP23025 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.95□□□□□ -0.18
XPAP23025 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XPAP23025 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms