Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.27□□□□□ -0.45
CTLA4P16410 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CTLA4P16410 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.27□□□□□ -0.45
CTLA4P16410 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CTLA4P16410 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.27□□□□□ -0.45
CTLA4P16410 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CTLA4P16410 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 PCDHB19P-202ENST00000625133 2914 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 AC106827.1-201ENST00000366454 431 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 TUBB2BP1-201ENST00000404155 871 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 MIR1247-201ENST00000408206 136 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 EEF1DP2-201ENST00000433698 843 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 RN7SL788P-201ENST00000460504 316 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 KRT8P13-201ENST00000463294 1010 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 AC095040.1-201ENST00000513286 675 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.26□□□□□ -0.45
CTLA4P16410 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.26□□□□□ -0.45
CTLA4P16410 MIR4326-201ENST00000582203 59 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.26□□□□□ -0.45
CTLA4P16410 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.26□□□□□ -0.45
CTLA4P16410 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CTLA4P16410 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 PI4KAP2-201ENST00000360806 2080 ntBASIC12.26□□□□□ -0.45
CTLA4P16410 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.26□□□□□ -0.45
CTLA4P16410 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CTLA4P16410 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CTLA4P16410 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CTLA4P16410 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.25□□□□□ -0.45
CTLA4P16410 AC026320.2-201ENST00000434379 478 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.25□□□□□ -0.45
CTLA4P16410 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.25□□□□□ -0.45
CTLA4P16410 AKR7A2P1-201ENST00000460134 915 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 RN7SL11P-201ENST00000471305 293 ntBASIC12.25□□□□□ -0.45
CTLA4P16410 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.25□□□□□ -0.45
CTLA4P16410 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.25□□□□□ -0.45
CTLA4P16410 AC008723.1-201ENST00000506922 207 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms