Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.67□□□□□ -0.22
COL6A2P12110 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COL6A2P12110 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
COL6A2P12110 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COL6A2P12110 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 RN7SKP214-201ENST00000364208 315 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.67□□□□□ -0.22
COL6A2P12110 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.67□□□□□ -0.22
COL6A2P12110 PPP1R2P4-201ENST00000424051 595 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 AC003958.1-201ENST00000435883 421 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 GPR53P-205ENST00000457298 1084 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 AC126915.1-201ENST00000522847 1038 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.67□□□□□ -0.22
COL6A2P12110 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.67□□□□□ -0.22
COL6A2P12110 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.67□□□□□ -0.22
COL6A2P12110 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.67□□□□□ -0.22
COL6A2P12110 AC132825.4-202ENST00000578792 434 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.67□□□□□ -0.22
COL6A2P12110 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.67□□□□□ -0.22
COL6A2P12110 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.67□□□□□ -0.22
COL6A2P12110 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.67□□□□□ -0.22
COL6A2P12110 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
COL6A2P12110 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.67□□□□□ -0.22
COL6A2P12110 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
COL6A2P12110 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL6A2P12110 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 AC004899.2-201ENST00000622993 3860 ntBASIC13.66□□□□□ -0.22
COL6A2P12110 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.66□□□□□ -0.22
COL6A2P12110 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 GK-202ENST00000378941 458 ntTSL 3 BASIC13.66□□□□□ -0.22
COL6A2P12110 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 AC125604.1-201ENST00000496255 707 ntBASIC13.66□□□□□ -0.22
COL6A2P12110 ALG1L13P-202ENST00000519320 584 ntBASIC13.66□□□□□ -0.22
COL6A2P12110 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.66□□□□□ -0.22
COL6A2P12110 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 AC005695.3-201ENST00000614522 232 ntBASIC13.66□□□□□ -0.22
COL6A2P12110 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.66□□□□□ -0.22
COL6A2P12110 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.66□□□□□ -0.22
COL6A2P12110 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL6A2P12110 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 CICP1-201ENST00000416803 2410 ntBASIC13.65□□□□□ -0.22
COL6A2P12110 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COL6A2P12110 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 AC106827.1-201ENST00000366454 431 ntBASIC13.65□□□□□ -0.22
COL6A2P12110 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL6A2P12110 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms