Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RFPL1O75677 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.9□□□□□ -0.19
RFPL1O75677 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 AL157791.1-201ENST00000553667 1699 ntBASIC13.89□□□□□ -0.19
RFPL1O75677 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 AC107375.1-201ENST00000564464 2231 ntBASIC13.89□□□□□ -0.19
RFPL1O75677 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RFPL1O75677 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.89□□□□□ -0.19
RFPL1O75677 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.89□□□□□ -0.19
RFPL1O75677 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.89□□□□□ -0.19
RFPL1O75677 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.89□□□□□ -0.19
RFPL1O75677 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 AC104073.2-201ENST00000453737 312 ntBASIC13.89□□□□□ -0.19
RFPL1O75677 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.89□□□□□ -0.19
RFPL1O75677 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.89□□□□□ -0.19
RFPL1O75677 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.89□□□□□ -0.19
RFPL1O75677 AC245140.2-201ENST00000624054 1939 ntBASIC13.89□□□□□ -0.19
RFPL1O75677 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RFPL1O75677 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.89□□□□□ -0.19
RFPL1O75677 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.89□□□□□ -0.19
RFPL1O75677 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.89□□□□□ -0.19
RFPL1O75677 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFPL1O75677 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.88□□□□□ -0.19
RFPL1O75677 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.88□□□□□ -0.19
RFPL1O75677 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.88□□□□□ -0.19
RFPL1O75677 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 TNRC18P1-201ENST00000502875 3650 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RFPL1O75677 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.88□□□□□ -0.19
RFPL1O75677 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.88□□□□□ -0.19
RFPL1O75677 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.88□□□□□ -0.19
RFPL1O75677 AL353637.1-201ENST00000451571 732 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 AC234782.1-201ENST00000451950 919 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 RN7SL277P-201ENST00000481521 288 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 AC125604.1-201ENST00000496255 707 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RFPL1O75677 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 AC090857.1-201ENST00000527400 390 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.88□□□□□ -0.19
RFPL1O75677 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.88□□□□□ -0.19
RFPL1O75677 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RFPL1O75677 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RFPL1O75677 AC093752.3-201ENST00000567343 901 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 MIR5572-201ENST00000583188 137 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.88□□□□□ -0.19
RFPL1O75677 AL133499.1-201ENST00000596207 608 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 AC090164.2-201ENST00000611487 516 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 AC068587.8-201ENST00000641239 219 ntBASIC13.88□□□□□ -0.19
RFPL1O75677 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFPL1O75677 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms