Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 HSPA8P5-201ENST00000456928 2069 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AL080243.1-201ENST00000423293 1060 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AC092896.1-201ENST00000465850 380 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AC005586.2-201ENST00000563946 837 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AP005264.5-201ENST00000590066 467 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 LINC02486-201ENST00000604157 3000 ntBASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF135Q8IUD6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.71□□□□□ -0.06
RNF135Q8IUD6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
RNF135Q8IUD6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
RNF135Q8IUD6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RNF135Q8IUD6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.71□□□□□ -0.06
RNF135Q8IUD6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 EEF1DP5-201ENST00000431410 772 ntBASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AL161932.2-201ENST00000435436 679 ntBASIC14.7□□□□□ -0.06
RNF135Q8IUD6 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 RN7SL147P-201ENST00000487345 298 ntBASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AC140658.4-201ENST00000561990 352 ntBASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AL021707.6-201ENST00000609212 491 ntBASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 AC090505.1-201ENST00000430515 1834 ntBASIC14.7□□□□□ -0.06
RNF135Q8IUD6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.7□□□□□ -0.06
RNF135Q8IUD6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF135Q8IUD6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms