Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
AP1S1P61966 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.87□□□□□ -0.19
AP1S1P61966 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S1P61966 AC018463.1-201ENST00000456674 917 ntBASIC13.87□□□□□ -0.19
AP1S1P61966 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 AC226150.1-201ENST00000544259 466 ntBASIC13.87□□□□□ -0.19
AP1S1P61966 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S1P61966 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.87□□□□□ -0.19
AP1S1P61966 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC13.87□□□□□ -0.19
AP1S1P61966 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
AP1S1P61966 MIR6858-201ENST00000620733 67 ntBASIC13.87□□□□□ -0.19
AP1S1P61966 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP1S1P61966 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP1S1P61966 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.87□□□□□ -0.19
AP1S1P61966 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP1S1P61966 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
AP1S1P61966 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S1P61966 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP1S1P61966 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
AP1S1P61966 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 AC041040.1-201ENST00000425197 460 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 RPL35P9-201ENST00000446059 350 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 LYPLA2P1-203ENST00000447689 696 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 RN7SL8P-201ENST00000461771 266 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S1P61966 RN7SL556P-201ENST00000582856 298 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 SPCS2P2-201ENST00000603270 608 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 AC002044.2-201ENST00000624910 970 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
AP1S1P61966 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
AP1S1P61966 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
AP1S1P61966 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP1S1P61966 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 AC024075.2-201ENST00000598112 1473 ntBASIC13.86□□□□□ -0.19
AP1S1P61966 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.86□□□□□ -0.19
AP1S1P61966 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP1S1P61966 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S1P61966 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S1P61966 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S1P61966 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S1P61966 IL9RP3-201ENST00000442856 1674 ntBASIC13.85□□□□□ -0.19
AP1S1P61966 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.85□□□□□ -0.19
AP1S1P61966 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S1P61966 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.85□□□□□ -0.19
AP1S1P61966 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP1S1P61966 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms