Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLDN6P56747 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 AP001267.2-201ENST00000532619 2086 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CLDN6P56747 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 U3.5-201ENST00000363448 216 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CLDN6P56747 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN6P56747 RPL18AP16-201ENST00000424057 531 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN6P56747 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN6P56747 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CLDN6P56747 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CLDN6P56747 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 AL050341.2-201ENST00000567508 1541 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN6P56747 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN6P56747 AC092115.1-201ENST00000566277 1402 ntBASIC13.22□□□□□ -0.29
CLDN6P56747 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN6P56747 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN6P56747 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN6P56747 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN6P56747 AL590824.1-201ENST00000403828 1349 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN6P56747 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN6P56747 DKKL1P1-201ENST00000400550 698 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 AHCYP3-201ENST00000420053 1279 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN6P56747 PGK1P2-201ENST00000431702 1214 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 AC133141.1-201ENST00000443015 339 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN6P56747 COQ10BP2-201ENST00000513804 724 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 AC004923.3-201ENST00000527532 355 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 MBP-230ENST00000528160 584 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN6P56747 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.21□□□□□ -0.29
CLDN6P56747 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN6P56747 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 AC245369.7-201ENST00000631386 350 ntBASIC13.21□□□□□ -0.29
CLDN6P56747 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CLDN6P56747 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN6P56747 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms