Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.44■□□□□ 0.38
RXRBP28702 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC17.44■□□□□ 0.38
RXRBP28702 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RXRBP28702 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC17.44■□□□□ 0.38
RXRBP28702 AC015959.1-201ENST00000623263 1377 ntBASIC17.44■□□□□ 0.38
RXRBP28702 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.44■□□□□ 0.38
RXRBP28702 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RXRBP28702 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC17.44■□□□□ 0.38
RXRBP28702 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC17.44■□□□□ 0.38
RXRBP28702 SLC25A51P3-201ENST00000521814 889 ntBASIC17.44■□□□□ 0.38
RXRBP28702 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC17.44■□□□□ 0.38
RXRBP28702 CHORDC2P-201ENST00000557601 1090 ntBASIC17.44■□□□□ 0.38
RXRBP28702 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC17.44■□□□□ 0.38
RXRBP28702 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC17.44■□□□□ 0.38
RXRBP28702 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RXRBP28702 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.44■□□□□ 0.38
RXRBP28702 AC008894.3-201ENST00000624324 3103 ntBASIC17.44■□□□□ 0.38
RXRBP28702 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.44■□□□□ 0.38
RXRBP28702 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RXRBP28702 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RXRBP28702 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 VTI1BP2-201ENST00000394154 696 ntBASIC17.43■□□□□ 0.38
RXRBP28702 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
RXRBP28702 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC17.43■□□□□ 0.38
RXRBP28702 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RXRBP28702 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC17.43■□□□□ 0.38
RXRBP28702 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC17.43■□□□□ 0.38
RXRBP28702 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC17.43■□□□□ 0.38
RXRBP28702 AC078880.3-201ENST00000603439 1121 ntBASIC17.43■□□□□ 0.38
RXRBP28702 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RXRBP28702 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RXRBP28702 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.43■□□□□ 0.38
RXRBP28702 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RXRBP28702 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RXRBP28702 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
RXRBP28702 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.42■□□□□ 0.38
RXRBP28702 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RXRBP28702 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 MIR324-201ENST00000362183 83 ntBASIC17.42■□□□□ 0.38
RXRBP28702 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RXRBP28702 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC17.42■□□□□ 0.38
RXRBP28702 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 RPSAP46-201ENST00000428316 882 ntBASIC17.42■□□□□ 0.38
RXRBP28702 PQLC1P1-201ENST00000434950 429 ntBASIC17.42■□□□□ 0.38
RXRBP28702 CYP4F60P-201ENST00000439449 549 ntBASIC17.42■□□□□ 0.38
RXRBP28702 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RXRBP28702 AC073465.1-201ENST00000456671 464 ntBASIC17.42■□□□□ 0.38
RXRBP28702 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC17.42■□□□□ 0.38
RXRBP28702 RN7SL521P-201ENST00000488398 297 ntBASIC17.42■□□□□ 0.38
RXRBP28702 KRT18P63-201ENST00000505463 979 ntBASIC17.42■□□□□ 0.38
RXRBP28702 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC17.42■□□□□ 0.38
RXRBP28702 HP-215ENST00000569639 568 ntTSL 4 BASIC17.42■□□□□ 0.38
RXRBP28702 AKR1B1P7-201ENST00000587229 952 ntBASIC17.42■□□□□ 0.38
RXRBP28702 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms