Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-EP13747 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-EP13747 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-EP13747 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-EP13747 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-EP13747 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-EP13747 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 KRT18P4-201ENST00000422599 1288 ntBASIC13.95□□□□□ -0.18
HLA-EP13747 AL512599.1-201ENST00000430724 685 ntBASIC13.95□□□□□ -0.18
HLA-EP13747 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.95□□□□□ -0.18
HLA-EP13747 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-EP13747 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-EP13747 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.95□□□□□ -0.18
HLA-EP13747 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-EP13747 AL160191.2-201ENST00000603975 601 ntBASIC13.95□□□□□ -0.18
HLA-EP13747 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.95□□□□□ -0.18
HLA-EP13747 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 AC126755.5-201ENST00000622756 267 ntBASIC13.95□□□□□ -0.18
HLA-EP13747 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.95□□□□□ -0.18
HLA-EP13747 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-EP13747 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-EP13747 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-EP13747 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-EP13747 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 AL109809.1-201ENST00000418979 1367 ntBASIC13.95□□□□□ -0.18
HLA-EP13747 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-EP13747 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-EP13747 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-EP13747 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.94□□□□□ -0.18
HLA-EP13747 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HLA-EP13747 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-EP13747 AK2P2-201ENST00000439142 405 ntBASIC13.94□□□□□ -0.18
HLA-EP13747 ASS1P2-201ENST00000439895 1223 ntBASIC13.94□□□□□ -0.18
HLA-EP13747 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-EP13747 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-EP13747 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-EP13747 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-EP13747 AP003392.6-201ENST00000607709 325 ntBASIC13.94□□□□□ -0.18
HLA-EP13747 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-EP13747 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-EP13747 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms