Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 AC008040.5-201ENST00000599781 1781 ntBASIC13.94□□□□□ -0.18
KDELR3O43731 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
KDELR3O43731 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.94□□□□□ -0.18
KDELR3O43731 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.94□□□□□ -0.18
KDELR3O43731 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.94□□□□□ -0.18
KDELR3O43731 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 CES1P2-201ENST00000566467 1242 ntBASIC13.94□□□□□ -0.18
KDELR3O43731 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.94□□□□□ -0.18
KDELR3O43731 AC026120.2-201ENST00000617239 309 ntBASIC13.94□□□□□ -0.18
KDELR3O43731 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.94□□□□□ -0.18
KDELR3O43731 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 KRT8P42-201ENST00000405771 1399 ntBASIC13.94□□□□□ -0.18
KDELR3O43731 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 GUCY2EP-203ENST00000531117 1918 ntBASIC13.94□□□□□ -0.18
KDELR3O43731 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KDELR3O43731 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.94□□□□□ -0.18
KDELR3O43731 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
KDELR3O43731 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
KDELR3O43731 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.93□□□□□ -0.18
KDELR3O43731 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 AL357563.1-201ENST00000404728 395 ntBASIC13.93□□□□□ -0.18
KDELR3O43731 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.93□□□□□ -0.18
KDELR3O43731 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.93□□□□□ -0.18
KDELR3O43731 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.93□□□□□ -0.18
KDELR3O43731 MIR5572-201ENST00000583188 137 ntBASIC13.93□□□□□ -0.18
KDELR3O43731 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
KDELR3O43731 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.93□□□□□ -0.18
KDELR3O43731 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
KDELR3O43731 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
KDELR3O43731 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KDELR3O43731 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms