Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPT1AP50416 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPT1AP50416 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPT1AP50416 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC15.13■□□□□ 0.01
CPT1AP50416 LINC02228-204ENST00000642115 2962 ntBASIC15.13■□□□□ 0.01
CPT1AP50416 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.13■□□□□ 0.01
CPT1AP50416 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.13■□□□□ 0.01
CPT1AP50416 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 AC093700.1-201ENST00000503348 717 ntBASIC15.13■□□□□ 0.01
CPT1AP50416 URB1-AS1-201ENST00000534991 831 ntBASIC15.13■□□□□ 0.01
CPT1AP50416 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
CPT1AP50416 DUT-207ENST00000559416 635 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 RN7SL480P-201ENST00000581481 294 ntBASIC15.13■□□□□ 0.01
CPT1AP50416 NEK4P3-201ENST00000604859 544 ntBASIC15.13■□□□□ 0.01
CPT1AP50416 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.13■□□□□ 0.01
CPT1AP50416 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC15.13■□□□□ 0.01
CPT1AP50416 AC008038.1-201ENST00000634247 1314 ntBASIC15.13■□□□□ 0.01
CPT1AP50416 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.13■□□□□ 0.01
CPT1AP50416 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPT1AP50416 WASH7P-201ENST00000488147 1351 ntBASIC15.12■□□□□ 0.01
CPT1AP50416 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.12■□□□□ 0.01
CPT1AP50416 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC15.12■□□□□ 0.01
CPT1AP50416 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.12■□□□□ 0.01
CPT1AP50416 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.12■□□□□ 0.01
CPT1AP50416 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPT1AP50416 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CPT1AP50416 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 SNORA50C-201ENST00000408535 133 ntBASIC15.12■□□□□ 0.01
CPT1AP50416 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.12■□□□□ 0.01
CPT1AP50416 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC15.12■□□□□ 0.01
CPT1AP50416 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CPT1AP50416 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC15.12■□□□□ 0.01
CPT1AP50416 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.12■□□□□ 0.01
CPT1AP50416 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC15.12■□□□□ 0.01
CPT1AP50416 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC15.12■□□□□ 0.01
CPT1AP50416 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC15.12■□□□□ 0.01
CPT1AP50416 RN7SL602P-201ENST00000578326 324 ntBASIC15.12■□□□□ 0.01
CPT1AP50416 RN7SL718P-201ENST00000581254 303 ntBASIC15.12■□□□□ 0.01
CPT1AP50416 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.12■□□□□ 0.01
CPT1AP50416 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPT1AP50416 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 MIR6816-201ENST00000620368 66 ntBASIC15.12■□□□□ 0.01
CPT1AP50416 SNORA50.1-201ENST00000628590 135 ntBASIC15.12■□□□□ 0.01
CPT1AP50416 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPT1AP50416 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.12■□□□□ 0.01
CPT1AP50416 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPT1AP50416 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 AC005912.2-201ENST00000619492 2400 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms