Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.47□□□□□ -0.41
ATRXP46100 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.47□□□□□ -0.41
ATRXP46100 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.47□□□□□ -0.41
ATRXP46100 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.47□□□□□ -0.41
ATRXP46100 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.47□□□□□ -0.41
ATRXP46100 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.47□□□□□ -0.41
ATRXP46100 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
ATRXP46100 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.47□□□□□ -0.41
ATRXP46100 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC12.47□□□□□ -0.41
ATRXP46100 HLA-W-207ENST00000439514 771 ntBASIC12.47□□□□□ -0.41
ATRXP46100 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC12.47□□□□□ -0.41
ATRXP46100 AC104333.3-201ENST00000449334 479 ntBASIC12.47□□□□□ -0.41
ATRXP46100 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC12.47□□□□□ -0.41
ATRXP46100 RPL3P9-201ENST00000463217 1183 ntBASIC12.47□□□□□ -0.41
ATRXP46100 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC12.47□□□□□ -0.41
ATRXP46100 FTH1-205ENST00000529631 507 ntTSL 4 BASIC12.47□□□□□ -0.41
ATRXP46100 AP005121.2-201ENST00000583306 1101 ntBASIC12.47□□□□□ -0.41
ATRXP46100 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC12.47□□□□□ -0.41
ATRXP46100 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC12.47□□□□□ -0.41
ATRXP46100 TMBIM7P-203ENST00000641617 1718 ntBASIC12.47□□□□□ -0.41
ATRXP46100 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.47□□□□□ -0.41
ATRXP46100 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC12.47□□□□□ -0.41
ATRXP46100 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATRXP46100 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
ATRXP46100 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC12.46□□□□□ -0.41
ATRXP46100 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC12.46□□□□□ -0.41
ATRXP46100 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC12.46□□□□□ -0.41
ATRXP46100 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 MIR4326-201ENST00000582203 59 ntBASIC12.46□□□□□ -0.41
ATRXP46100 AC006273.1-201ENST00000606966 861 ntBASIC12.46□□□□□ -0.41
ATRXP46100 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.46□□□□□ -0.41
ATRXP46100 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.46□□□□□ -0.41
ATRXP46100 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATRXP46100 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.46□□□□□ -0.42
ATRXP46100 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ATRXP46100 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
ATRXP46100 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ATRXP46100 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ATRXP46100 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ATRXP46100 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.46□□□□□ -0.42
ATRXP46100 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC12.46□□□□□ -0.42
ATRXP46100 AC006987.4-201ENST00000430032 279 ntBASIC12.46□□□□□ -0.42
ATRXP46100 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 AC015818.1-201ENST00000451011 244 ntBASIC12.46□□□□□ -0.42
ATRXP46100 CMC2-202ENST00000486645 766 ntTSL 3 BASIC12.46□□□□□ -0.42
ATRXP46100 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC12.46□□□□□ -0.42
ATRXP46100 DNM1P17-201ENST00000512082 426 ntBASIC12.46□□□□□ -0.42
ATRXP46100 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC12.46□□□□□ -0.42
ATRXP46100 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC12.46□□□□□ -0.42
ATRXP46100 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ATRXP46100 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms