Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 LINC00244-201ENST00000625073 613 ntBASIC14.01□□□□□ -0.17
XPAP23025 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14□□□□□ -0.17
XPAP23025 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
XPAP23025 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
XPAP23025 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14□□□□□ -0.17
XPAP23025 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14□□□□□ -0.17
XPAP23025 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14□□□□□ -0.17
XPAP23025 RPSAP31-201ENST00000416648 895 ntBASIC14□□□□□ -0.17
XPAP23025 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14□□□□□ -0.17
XPAP23025 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 AP000911.2-201ENST00000534330 502 ntBASIC14□□□□□ -0.17
XPAP23025 NPM1P43-201ENST00000558669 786 ntBASIC14□□□□□ -0.17
XPAP23025 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14□□□□□ -0.17
XPAP23025 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14□□□□□ -0.17
XPAP23025 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14□□□□□ -0.17
XPAP23025 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
XPAP23025 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14□□□□□ -0.17
XPAP23025 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.99□□□□□ -0.17
XPAP23025 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.99□□□□□ -0.17
XPAP23025 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.99□□□□□ -0.17
XPAP23025 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.99□□□□□ -0.17
XPAP23025 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
XPAP23025 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
XPAP23025 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
XPAP23025 RPL3P2-204ENST00000413027 1203 ntBASIC13.99□□□□□ -0.17
XPAP23025 AC005722.1-201ENST00000431878 964 ntBASIC13.99□□□□□ -0.17
XPAP23025 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 AC018463.1-201ENST00000456674 917 ntBASIC13.99□□□□□ -0.17
XPAP23025 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.99□□□□□ -0.17
XPAP23025 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.99□□□□□ -0.17
XPAP23025 DNM1P30-201ENST00000563586 452 ntBASIC13.99□□□□□ -0.17
XPAP23025 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
XPAP23025 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
XPAP23025 AC012073.1-201ENST00000606114 1108 ntBASIC13.99□□□□□ -0.17
XPAP23025 RN7SL736P-201ENST00000613111 269 ntBASIC13.99□□□□□ -0.17
XPAP23025 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.99□□□□□ -0.17
XPAP23025 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
XPAP23025 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms