Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 RCC2P1-201ENST00000452257 1476 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 HLA-DMA-203ENST00000395305 777 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.41□□□□□ -0.42
CNOT4O95628 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 ERP29P1-201ENST00000442902 706 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 COQ10BP2-201ENST00000513804 724 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.41□□□□□ -0.42
CNOT4O95628 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.41□□□□□ -0.42
CNOT4O95628 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC132825.4-202ENST00000578792 434 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 MIR2392-201ENST00000584881 84 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.41□□□□□ -0.42
CNOT4O95628 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC242376.2-201ENST00000619355 883 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 PTPRVP-205ENST00000641549 5067 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.41□□□□□ -0.42
CNOT4O95628 AC011474.4-201ENST00000623523 2076 ntBASIC12.41□□□□□ -0.42
CNOT4O95628 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.41□□□□□ -0.42
CNOT4O95628 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CNOT4O95628 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 AC061965.1-201ENST00000560524 1465 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 MST1P2-201ENST00000457982 2291 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.4□□□□□ -0.42
CNOT4O95628 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.4□□□□□ -0.42
CNOT4O95628 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 RPL13AP19-201ENST00000434320 584 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.4□□□□□ -0.42
CNOT4O95628 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 SCARNA12-201ENST00000459155 270 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.4□□□□□ -0.42
CNOT4O95628 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 CTBP2P4-201ENST00000513884 920 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 DNM1P30-201ENST00000563586 452 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.4□□□□□ -0.42
CNOT4O95628 MIR4522-201ENST00000584932 87 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.4□□□□□ -0.42
CNOT4O95628 AC138894.2-201ENST00000602838 371 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 MIR6842-201ENST00000612539 65 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms