Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 KF455155.1-201ENST00000604493 303 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 PTPN20CP-201ENST00000614090 920 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC137723.2-201ENST00000623540 398 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC064850.1-201ENST00000413279 1398 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 WASH7P-201ENST00000488147 1351 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 FAM226B-201ENST00000602508 1490 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC008620.2-201ENST00000510294 1569 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC008536.3-201ENST00000623282 1599 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AL157823.1-201ENST00000403727 628 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 RPL18AP16-201ENST00000424057 531 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC023141.7-201ENST00000430646 407 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC006116.2-201ENST00000589958 988 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 PRMT1P1-201ENST00000604252 1009 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 AC005252.3-201ENST00000623855 2258 ntBASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.04□□□□□ -0.32
CCDC187A0A096LP49 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CCDC187A0A096LP49 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms