Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN6P56747 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 AC048382.6-201ENST00000621980 1223 ntBASIC13.26□□□□□ -0.29
CLDN6P56747 AC117489.1-201ENST00000625169 3217 ntBASIC13.26□□□□□ -0.29
CLDN6P56747 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN6P56747 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CLDN6P56747 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN6P56747 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CLDN6P56747 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.25□□□□□ -0.29
CLDN6P56747 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDN6P56747 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 SALL4P6-201ENST00000429385 1691 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 NQO2-204ENST00000380454 851 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 AL121949.3-201ENST00000406684 385 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 MIR1307-201ENST00000408840 149 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 HMGA1P1-201ENST00000415560 1062 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 AC147876.1-201ENST00000504408 322 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 AC113347.2-201ENST00000512350 279 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 AC016582.2-202ENST00000587765 1094 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 NEK4P3-201ENST00000604859 544 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 AC080013.5-201ENST00000607044 679 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDN6P56747 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.25□□□□□ -0.29
CLDN6P56747 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 AC097359.2-201ENST00000604992 2389 ntBASIC13.25□□□□□ -0.29
CLDN6P56747 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN6P56747 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN6P56747 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN6P56747 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CLDN6P56747 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN6P56747 HSPA8P5-201ENST00000456928 2069 ntBASIC13.24□□□□□ -0.29
CLDN6P56747 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN6P56747 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN6P56747 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms