Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 IGHV1-12-201ENST00000518307 205 ntBASIC10.17□□□□□ -0.78
APOC4P55056 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC10.17□□□□□ -0.78
APOC4P55056 NEU3-207ENST00000534628 746 ntTSL 2 BASIC10.17□□□□□ -0.78
APOC4P55056 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
APOC4P55056 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
APOC4P55056 GARS-210ENST00000627489 324 ntTSL 4 BASIC10.17□□□□□ -0.78
APOC4P55056 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 AC008620.2-201ENST00000510294 1569 ntBASIC10.17□□□□□ -0.78
APOC4P55056 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
APOC4P55056 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
APOC4P55056 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
APOC4P55056 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
APOC4P55056 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.17□□□□□ -0.78
APOC4P55056 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.16□□□□□ -0.78
APOC4P55056 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC10.16□□□□□ -0.78
APOC4P55056 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 AC084752.1-201ENST00000509766 622 ntBASIC10.16□□□□□ -0.78
APOC4P55056 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC10.16□□□□□ -0.78
APOC4P55056 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC10.16□□□□□ -0.78
APOC4P55056 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 MIR4326-201ENST00000582203 59 ntBASIC10.16□□□□□ -0.78
APOC4P55056 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC10.16□□□□□ -0.78
APOC4P55056 AC010976.2-201ENST00000609697 852 ntBASIC10.16□□□□□ -0.78
APOC4P55056 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
APOC4P55056 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
APOC4P55056 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
APOC4P55056 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms