Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 LAP3P2-201ENST00000454686 1454 ntBASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 MIR6842-201ENST00000612539 65 ntBASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 YRDCP1-201ENST00000621419 643 ntBASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 AC123912.3-201ENST00000600907 1367 ntBASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCNYL3P0C7X3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 HLA-DMA-203ENST00000395305 777 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC092580.1-201ENST00000433998 658 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC092638.2-201ENST00000441105 947 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC092905.1-201ENST00000467527 949 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 ALG1L13P-202ENST00000519320 584 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 MIR4649-201ENST00000582839 64 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AP000322.3-201ENST00000608665 388 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 AP001184.1-201ENST00000637936 376 ntBASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCNYL3P0C7X3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms