Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK2O00526 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.15□□□□□ -0.62
UPK2O00526 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UPK2O00526 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 RN7SKP214-201ENST00000364208 315 ntBASIC11.15□□□□□ -0.62
UPK2O00526 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
UPK2O00526 TUBB2BP1-201ENST00000404155 871 ntBASIC11.15□□□□□ -0.62
UPK2O00526 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK2O00526 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK2O00526 AC125604.1-201ENST00000496255 707 ntBASIC11.15□□□□□ -0.62
UPK2O00526 IGHV3-71-201ENST00000523324 359 ntBASIC11.15□□□□□ -0.62
UPK2O00526 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 AL583810.1-201ENST00000553344 1045 ntBASIC11.15□□□□□ -0.62
UPK2O00526 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 MIR3940-201ENST00000579148 102 ntBASIC11.15□□□□□ -0.62
UPK2O00526 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.15□□□□□ -0.62
UPK2O00526 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK2O00526 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.15□□□□□ -0.62
UPK2O00526 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK2O00526 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 AC091271.1-201ENST00000611877 1162 ntBASIC11.15□□□□□ -0.62
UPK2O00526 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.15□□□□□ -0.62
UPK2O00526 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK2O00526 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
UPK2O00526 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
UPK2O00526 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
UPK2O00526 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
UPK2O00526 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
UPK2O00526 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
UPK2O00526 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.15□□□□□ -0.63
UPK2O00526 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
UPK2O00526 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 AL805961.2-201ENST00000642139 4817 ntBASIC11.14□□□□□ -0.63
UPK2O00526 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.14□□□□□ -0.63
UPK2O00526 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC11.14□□□□□ -0.63
UPK2O00526 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 NDUFB10P1-201ENST00000567319 521 ntBASIC11.14□□□□□ -0.63
UPK2O00526 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC11.14□□□□□ -0.63
UPK2O00526 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms