Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
COPS3Q9UNS2 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 NME2P1-201ENST00000426182 414 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 KLF2P4-201ENST00000451959 1225 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AC079316.1-201ENST00000548397 411 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AC005730.2-201ENST00000564549 1184 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AC008805.1-201ENST00000590892 364 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AL161773.1-201ENST00000624845 863 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 AL358472.5-202ENST00000641448 1267 ntBASIC12.44□□□□□ -0.42
COPS3Q9UNS2 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COPS3Q9UNS2 FAM90A7P-201ENST00000382628 1395 ntBASIC12.43□□□□□ -0.42
COPS3Q9UNS2 FAM90A23P-201ENST00000400136 1395 ntBASIC12.43□□□□□ -0.42
COPS3Q9UNS2 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 Z98257.2-202ENST00000641138 1548 ntBASIC12.43□□□□□ -0.42
COPS3Q9UNS2 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 HMGN1P19-201ENST00000436976 333 ntBASIC12.43□□□□□ -0.42
COPS3Q9UNS2 RPL18P13-201ENST00000478088 569 ntBASIC12.43□□□□□ -0.42
COPS3Q9UNS2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CR383656.12-201ENST00000549567 513 ntBASIC12.43□□□□□ -0.42
COPS3Q9UNS2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.43□□□□□ -0.42
COPS3Q9UNS2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms