Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 AC006987.1-201ENST00000413610 527 ntBASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 AL022334.2-201ENST00000610000 484 ntBASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHACTR1Q9C0D0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 PCDHB17P-202ENST00000623466 3066 ntBASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AC005740.1-201ENST00000515639 522 ntBASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHACTR1Q9C0D0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PHACTR1Q9C0D0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms