Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 RN7SL375P-201ENST00000492442 298 ntBASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC023968.2-201ENST00000560593 1049 ntBASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AC060766.1-201ENST00000590824 627 ntBASIC14.76□□□□□ -0.05
RNF135Q8IUD6 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF135Q8IUD6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 KRT18P4-201ENST00000422599 1288 ntBASIC14.75□□□□□ -0.05
RNF135Q8IUD6 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 AC027612.2-202ENST00000445955 1199 ntBASIC14.75□□□□□ -0.05
RNF135Q8IUD6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 BCRP4-201ENST00000506079 804 ntBASIC14.75□□□□□ -0.05
RNF135Q8IUD6 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 SNORD3B-1-201ENST00000577988 758 ntBASIC14.75□□□□□ -0.05
RNF135Q8IUD6 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 CR392039.1-201ENST00000623217 204 ntBASIC14.75□□□□□ -0.05
RNF135Q8IUD6 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RNF135Q8IUD6 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms