Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CAP2P1-201ENST00000557743 1390 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 OR2K2-202ENST00000374428 1038 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AL627231.1-201ENST00000394467 1125 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CHCHD2P9-201ENST00000461726 456 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 RN7SL81P-201ENST00000493781 261 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 RN7SL371P-201ENST00000578099 267 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AP005264.5-201ENST00000590066 467 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AC106872.11-201ENST00000605838 421 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 AC009560.1-201ENST00000620208 434 ntBASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 PPA1-206ENST00000625364 644 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CCDC144NLQ6NUI1 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AL358781.1-202ENST00000321081 1360 ntBASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC111170.3-201ENST00000624282 2464 ntBASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC011481.3-201ENST00000623895 5594 ntBASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC005562.1-201ENST00000583030 3219 ntBASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AL512306.1-201ENST00000432698 848 ntBASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC018638.5-201ENST00000450885 754 ntBASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC11.31□□□□□ -0.6
CCDC144NLQ6NUI1 AC103810.10-201ENST00000606504 343 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms