Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYSMD4Q5XG99 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 RCC2P5-201ENST00000492126 1487 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AL121753.2-201ENST00000624581 1461 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 HSD3BP1-201ENST00000286193 1111 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 TUBB2BP1-201ENST00000404155 871 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 FAM197Y6-201ENST00000420524 766 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CTBP2P6-201ENST00000526402 1229 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 ABCC6P1-203ENST00000565566 1170 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 RN7SL162P-201ENST00000579233 292 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYSMD4Q5XG99 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CICP24-201ENST00000605464 2705 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 AC020763.3-201ENST00000625095 2904 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 RN7SKP212-201ENST00000410851 328 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 DNM1P46-202ENST00000415963 882 ntBASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD4Q5XG99 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms