Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.18■□□□□ 0.02
CPT1AP50416 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.18■□□□□ 0.02
CPT1AP50416 RNU1-80P-201ENST00000459500 161 ntBASIC15.18■□□□□ 0.02
CPT1AP50416 AC147876.1-201ENST00000504408 322 ntBASIC15.18■□□□□ 0.02
CPT1AP50416 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.18■□□□□ 0.02
CPT1AP50416 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC15.18■□□□□ 0.02
CPT1AP50416 ANKRD26P1-203ENST00000569528 966 ntBASIC15.18■□□□□ 0.02
CPT1AP50416 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.18■□□□□ 0.02
CPT1AP50416 RN7SL162P-201ENST00000579233 292 ntBASIC15.18■□□□□ 0.02
CPT1AP50416 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC15.18■□□□□ 0.02
CPT1AP50416 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC15.18■□□□□ 0.02
CPT1AP50416 AC006116.2-201ENST00000589958 988 ntBASIC15.18■□□□□ 0.02
CPT1AP50416 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.18■□□□□ 0.02
CPT1AP50416 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.18■□□□□ 0.02
CPT1AP50416 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC15.18■□□□□ 0.02
CPT1AP50416 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CPT1AP50416 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.18■□□□□ 0.02
CPT1AP50416 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.18■□□□□ 0.02
CPT1AP50416 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPT1AP50416 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPT1AP50416 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPT1AP50416 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPT1AP50416 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 PTN-202ENST00000393083 1599 ntTSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPT1AP50416 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.17■□□□□ 0.02
CPT1AP50416 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.17■□□□□ 0.02
CPT1AP50416 RNA5SP420-201ENST00000516997 137 ntBASIC15.17■□□□□ 0.02
CPT1AP50416 AP000920.1-201ENST00000531824 344 ntBASIC15.17■□□□□ 0.02
CPT1AP50416 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC15.17■□□□□ 0.02
CPT1AP50416 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.17■□□□□ 0.02
CPT1AP50416 GRAMD4P6-201ENST00000556999 244 ntBASIC15.17■□□□□ 0.02
CPT1AP50416 AL591424.3-201ENST00000614278 872 ntBASIC15.17■□□□□ 0.02
CPT1AP50416 AC020922.4-201ENST00000621389 339 ntBASIC15.17■□□□□ 0.02
CPT1AP50416 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPT1AP50416 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPT1AP50416 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC15.17■□□□□ 0.02
CPT1AP50416 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.16■□□□□ 0.02
CPT1AP50416 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CPT1AP50416 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.16■□□□□ 0.02
CPT1AP50416 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.16■□□□□ 0.02
CPT1AP50416 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPT1AP50416 MIR632-201ENST00000385193 94 ntBASIC15.16■□□□□ 0.02
CPT1AP50416 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms