Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 YBX1P3-201ENST00000468366 909 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 AC022447.5-201ENST00000504817 392 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.85■□□□□ 0.29
PDE6BP35913 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC16.85■□□□□ 0.29
PDE6BP35913 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC16.85■□□□□ 0.29
PDE6BP35913 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC16.85■□□□□ 0.29
PDE6BP35913 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC16.85■□□□□ 0.29
PDE6BP35913 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC16.85■□□□□ 0.29
PDE6BP35913 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PDE6BP35913 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PDE6BP35913 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PDE6BP35913 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDE6BP35913 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDE6BP35913 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.84■□□□□ 0.29
PDE6BP35913 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC16.84■□□□□ 0.29
PDE6BP35913 RFNG-202ENST00000429557 994 ntTSL 5 BASIC16.84■□□□□ 0.29
PDE6BP35913 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC16.84■□□□□ 0.29
PDE6BP35913 HNRNPA1P3-201ENST00000440968 551 ntBASIC16.84■□□□□ 0.29
PDE6BP35913 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PDE6BP35913 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC16.84■□□□□ 0.29
PDE6BP35913 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC16.84■□□□□ 0.29
PDE6BP35913 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC16.84■□□□□ 0.29
PDE6BP35913 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 MIR6125-201ENST00000618986 96 ntBASIC16.84■□□□□ 0.29
PDE6BP35913 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDE6BP35913 AC092053.3-201ENST00000641308 4975 ntBASIC16.84■□□□□ 0.29
PDE6BP35913 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 AC007686.3-201ENST00000619017 3487 ntBASIC16.84■□□□□ 0.29
PDE6BP35913 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.84■□□□□ 0.29
PDE6BP35913 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDE6BP35913 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6BP35913 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDE6BP35913 AC063926.3-201ENST00000624734 5658 ntBASIC16.83■□□□□ 0.29
PDE6BP35913 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6BP35913 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PDE6BP35913 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6BP35913 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6BP35913 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDE6BP35913 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6BP35913 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 SFPQP1-201ENST00000446621 1786 ntBASIC16.83■□□□□ 0.28
PDE6BP35913 RPSAP16-201ENST00000447583 821 ntBASIC16.83■□□□□ 0.28
PDE6BP35913 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6BP35913 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6BP35913 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDE6BP35913 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC16.83■□□□□ 0.28
PDE6BP35913 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6BP35913 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.83■□□□□ 0.28
PDE6BP35913 LINC02486-201ENST00000604157 3000 ntBASIC16.83■□□□□ 0.28
PDE6BP35913 AC148476.1-201ENST00000622182 705 ntBASIC16.83■□□□□ 0.28
PDE6BP35913 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6BP35913 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6BP35913 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6BP35913 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDE6BP35913 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDE6BP35913 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms