Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NR4A1P22736 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.02□□□□□ -0.33
NR4A1P22736 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NR4A1P22736 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NR4A1P22736 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NR4A1P22736 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NR4A1P22736 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.01□□□□□ -0.33
NR4A1P22736 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 AC007969.1-201ENST00000433675 447 ntBASIC13.01□□□□□ -0.33
NR4A1P22736 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.01□□□□□ -0.33
NR4A1P22736 RPS2P32-201ENST00000439199 892 ntBASIC13.01□□□□□ -0.33
NR4A1P22736 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.01□□□□□ -0.33
NR4A1P22736 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.01□□□□□ -0.33
NR4A1P22736 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NR4A1P22736 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NR4A1P22736 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.01□□□□□ -0.33
NR4A1P22736 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC13.01□□□□□ -0.33
NR4A1P22736 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NR4A1P22736 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NR4A1P22736 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13□□□□□ -0.33
NR4A1P22736 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC13□□□□□ -0.33
NR4A1P22736 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13□□□□□ -0.33
NR4A1P22736 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NR4A1P22736 MIR1202-201ENST00000408529 83 ntBASIC13□□□□□ -0.33
NR4A1P22736 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13□□□□□ -0.33
NR4A1P22736 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13□□□□□ -0.33
NR4A1P22736 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms