Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF3P18847 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ATF3P18847 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
ATF3P18847 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ATF3P18847 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC18.59■□□□□ 0.57
ATF3P18847 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 FGD5P1-202ENST00000614866 2498 ntBASIC18.59■□□□□ 0.57
ATF3P18847 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC18.59■□□□□ 0.57
ATF3P18847 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 OR2A1-AS1-203ENST00000468575 568 ntBASIC18.59■□□□□ 0.57
ATF3P18847 AC067942.1-202ENST00000471756 1057 ntBASIC18.59■□□□□ 0.57
ATF3P18847 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF3P18847 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
ATF3P18847 AC104759.1-201ENST00000559109 939 ntBASIC18.59■□□□□ 0.57
ATF3P18847 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC18.59■□□□□ 0.57
ATF3P18847 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC18.59■□□□□ 0.57
ATF3P18847 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC18.59■□□□□ 0.57
ATF3P18847 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC18.59■□□□□ 0.57
ATF3P18847 BAP1-211ENST00000615113 489 ntBASIC18.59■□□□□ 0.57
ATF3P18847 AC112702.1-201ENST00000623712 366 ntBASIC18.59■□□□□ 0.57
ATF3P18847 AC010335.3-201ENST00000623767 531 ntBASIC18.59■□□□□ 0.57
ATF3P18847 AC091905.3-201ENST00000624959 234 ntBASIC18.59■□□□□ 0.57
ATF3P18847 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF3P18847 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ATF3P18847 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.59■□□□□ 0.57
ATF3P18847 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATF3P18847 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.59■□□□□ 0.57
ATF3P18847 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF3P18847 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.58■□□□□ 0.57
ATF3P18847 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.58■□□□□ 0.57
ATF3P18847 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.58■□□□□ 0.57
ATF3P18847 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
ATF3P18847 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ATF3P18847 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF3P18847 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.58■□□□□ 0.56
ATF3P18847 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 AC138392.1-201ENST00000427577 921 ntBASIC18.58■□□□□ 0.56
ATF3P18847 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATF3P18847 AC010677.1-201ENST00000441690 412 ntBASIC18.58■□□□□ 0.56
ATF3P18847 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC18.58■□□□□ 0.56
ATF3P18847 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC18.58■□□□□ 0.56
ATF3P18847 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC18.58■□□□□ 0.56
ATF3P18847 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC18.58■□□□□ 0.56
ATF3P18847 PMM2-216ENST00000569958 698 ntTSL 2 BASIC18.58■□□□□ 0.56
ATF3P18847 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC18.58■□□□□ 0.56
ATF3P18847 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 AL158032.2-201ENST00000616818 195 ntBASIC18.58■□□□□ 0.56
ATF3P18847 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.58■□□□□ 0.56
ATF3P18847 AC113367.3-201ENST00000508316 1912 ntBASIC18.58■□□□□ 0.56
ATF3P18847 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATF3P18847 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC18.57■□□□□ 0.56
ATF3P18847 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 CD9-212ENST00000610354 1315 ntTSL 5 BASIC18.57■□□□□ 0.56
ATF3P18847 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.57■□□□□ 0.56
ATF3P18847 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATF3P18847 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC18.57■□□□□ 0.56
ATF3P18847 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF3P18847 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC18.57■□□□□ 0.56
ATF3P18847 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC18.57■□□□□ 0.56
ATF3P18847 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC18.57■□□□□ 0.56
ATF3P18847 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC18.57■□□□□ 0.56
ATF3P18847 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC18.57■□□□□ 0.56
ATF3P18847 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC18.57■□□□□ 0.56
ATF3P18847 AC015818.3-201ENST00000583797 589 ntBASIC18.57■□□□□ 0.56
ATF3P18847 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC18.57■□□□□ 0.56
ATF3P18847 AL356740.1-201ENST00000602192 1297 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms