Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 CAP2P1-201ENST00000557743 1390 ntBASIC10.99□□□□□ -0.65
TRGV3P03979 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
TRGV3P03979 KRT8P31-201ENST00000504812 1408 ntBASIC10.99□□□□□ -0.65
TRGV3P03979 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
TRGV3P03979 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.99□□□□□ -0.65
TRGV3P03979 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TRGV3P03979 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.99□□□□□ -0.65
TRGV3P03979 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRGV3P03979 TCAF1P1-201ENST00000414990 2232 ntBASIC10.99□□□□□ -0.65
TRGV3P03979 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 OR2K2-202ENST00000374428 1038 ntBASIC10.98□□□□□ -0.65
TRGV3P03979 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TRGV3P03979 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TRGV3P03979 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
TRGV3P03979 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 AC097724.1-201ENST00000609581 426 ntBASIC10.98□□□□□ -0.65
TRGV3P03979 AL021578.1-201ENST00000613646 709 ntBASIC10.98□□□□□ -0.65
TRGV3P03979 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
TRGV3P03979 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV3P03979 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV3P03979 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms