Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AL049840.2-201ENST00000602722 535 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC012073.1-201ENST00000606114 1108 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PPT1-213ENST00000641319 2388 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC152010.1-201ENST00000415779 2006 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC090643.2-201ENST00000623442 2029 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 AC089987.1-201ENST00000551654 2209 ntBASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H3F3CQ6NXT2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AC021305.1-201ENST00000520656 1514 ntBASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 RPL3P2-204ENST00000413027 1203 ntBASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AC073210.1-201ENST00000414799 232 ntBASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 LINC00634-202ENST00000505157 222 ntBASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H3F3CQ6NXT2 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 AL627389.1-201ENST00000413508 1182 ntBASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
H3F3CQ6NXT2 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms