Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GABREP78334 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GABREP78334 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GABREP78334 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 CTSL-202ENST00000342020 933 ntTSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
GABREP78334 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.18□□□□□ -0.3
GABREP78334 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.18□□□□□ -0.3
GABREP78334 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.18□□□□□ -0.3
GABREP78334 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.18□□□□□ -0.3
GABREP78334 FTLP5-201ENST00000586853 534 ntBASIC13.18□□□□□ -0.3
GABREP78334 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.18□□□□□ -0.3
GABREP78334 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 AC015802.1-201ENST00000588104 1449 ntBASIC13.18□□□□□ -0.3
GABREP78334 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 AC073869.1-201ENST00000415574 2762 ntBASIC13.18□□□□□ -0.3
GABREP78334 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
GABREP78334 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.18□□□□□ -0.3
GABREP78334 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GABREP78334 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.17□□□□□ -0.3
GABREP78334 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
GABREP78334 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
GABREP78334 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
GABREP78334 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.17□□□□□ -0.3
GABREP78334 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.17□□□□□ -0.3
GABREP78334 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 AC092115.1-201ENST00000566277 1402 ntBASIC13.17□□□□□ -0.3
GABREP78334 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.17□□□□□ -0.3
GABREP78334 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 SNORA57-201ENST00000383870 149 ntBASIC13.17□□□□□ -0.3
GABREP78334 AC004522.1-201ENST00000419978 654 ntBASIC13.17□□□□□ -0.3
GABREP78334 EEF1DP2-201ENST00000433698 843 ntBASIC13.17□□□□□ -0.3
GABREP78334 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.17□□□□□ -0.3
GABREP78334 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.17□□□□□ -0.3
GABREP78334 HIST1H2APS2-201ENST00000454426 370 ntBASIC13.17□□□□□ -0.3
GABREP78334 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 KRT18P15-201ENST00000458108 1291 ntBASIC13.17□□□□□ -0.3
GABREP78334 RPS18P9-201ENST00000482817 460 ntBASIC13.17□□□□□ -0.3
GABREP78334 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.17□□□□□ -0.3
GABREP78334 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
GABREP78334 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.17□□□□□ -0.3
GABREP78334 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.17□□□□□ -0.3
GABREP78334 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GABREP78334 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms