Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 AC008620.2-201ENST00000510294 1569 ntBASIC12.13□□□□□ -0.47
UBA52P62987 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
UBA52P62987 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UBA52P62987 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 AC012531.1-201ENST00000562848 2680 ntBASIC12.12□□□□□ -0.47
UBA52P62987 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.12□□□□□ -0.47
UBA52P62987 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.12□□□□□ -0.47
UBA52P62987 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.12□□□□□ -0.47
UBA52P62987 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.12□□□□□ -0.47
UBA52P62987 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.12□□□□□ -0.47
UBA52P62987 AC021723.1-201ENST00000486306 515 ntBASIC12.12□□□□□ -0.47
UBA52P62987 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.12□□□□□ -0.47
UBA52P62987 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 AL391280.1-201ENST00000506969 1062 ntBASIC12.12□□□□□ -0.47
UBA52P62987 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.12□□□□□ -0.47
UBA52P62987 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 AC005730.2-201ENST00000564549 1184 ntBASIC12.12□□□□□ -0.47
UBA52P62987 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.12□□□□□ -0.47
UBA52P62987 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UBA52P62987 AL603764.1-201ENST00000636452 321 ntBASIC12.12□□□□□ -0.47
UBA52P62987 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
UBA52P62987 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBA52P62987 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.12□□□□□ -0.47
UBA52P62987 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.11□□□□□ -0.47
UBA52P62987 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 AC060814.4-201ENST00000594169 2163 ntBASIC12.11□□□□□ -0.47
UBA52P62987 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.11□□□□□ -0.47
UBA52P62987 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 AL805961.2-201ENST00000642139 4817 ntBASIC12.11□□□□□ -0.47
UBA52P62987 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.11□□□□□ -0.47
UBA52P62987 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.11□□□□□ -0.47
UBA52P62987 AL354877.1-201ENST00000424412 413 ntBASIC12.11□□□□□ -0.47
UBA52P62987 AC003958.1-201ENST00000435883 421 ntBASIC12.11□□□□□ -0.47
UBA52P62987 MAGEA5-201ENST00000446757 942 ntBASIC12.11□□□□□ -0.47
UBA52P62987 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.11□□□□□ -0.47
UBA52P62987 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBA52P62987 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.11□□□□□ -0.47
UBA52P62987 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms