Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 IL9RP3-201ENST00000442856 1674 ntBASIC15.13■□□□□ 0.01
NCKAP1LP55160 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 RPSAP31-201ENST00000416648 895 ntBASIC15.13■□□□□ 0.01
NCKAP1LP55160 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 NPM1P43-201ENST00000558669 786 ntBASIC15.13■□□□□ 0.01
NCKAP1LP55160 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AC073911.3-201ENST00000624401 631 ntBASIC15.13■□□□□ 0.01
NCKAP1LP55160 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AL513497.1-201ENST00000624273 2083 ntBASIC15.13■□□□□ 0.01
NCKAP1LP55160 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NCKAP1LP55160 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCKAP1LP55160 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 MSNP1-201ENST00000511640 1732 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 ST20-AS1-201ENST00000560255 4223 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 AC107918.4-201ENST00000641966 3141 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 VENTXP3-201ENST00000546480 773 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 MIR4706-201ENST00000582134 82 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 RN7SL556P-201ENST00000582856 298 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCKAP1LP55160 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCKAP1LP55160 AL445250.1-201ENST00000641671 2259 ntBASIC15.12■□□□□ 0.01
NCKAP1LP55160 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 AC138969.2-201ENST00000532739 9932 ntBASIC15.11■□□□□ 0.01
NCKAP1LP55160 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCKAP1LP55160 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms