Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBP50607 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.69□□□□□ -0.06
TUBP50607 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.69□□□□□ -0.06
TUBP50607 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TUBP50607 RN7SL8P-201ENST00000461771 266 ntBASIC14.69□□□□□ -0.06
TUBP50607 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.69□□□□□ -0.06
TUBP50607 MIR4649-201ENST00000582839 64 ntBASIC14.69□□□□□ -0.06
TUBP50607 RN7SL470P-201ENST00000583069 259 ntBASIC14.69□□□□□ -0.06
TUBP50607 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.69□□□□□ -0.06
TUBP50607 AC007250.1-201ENST00000608934 338 ntBASIC14.69□□□□□ -0.06
TUBP50607 BAP1-211ENST00000615113 489 ntBASIC14.69□□□□□ -0.06
TUBP50607 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TUBP50607 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBP50607 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TUBP50607 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.69□□□□□ -0.06
TUBP50607 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.69□□□□□ -0.06
TUBP50607 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TUBP50607 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBP50607 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.68□□□□□ -0.06
TUBP50607 RPL17P11-201ENST00000417593 544 ntBASIC14.68□□□□□ -0.06
TUBP50607 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 AC092638.2-201ENST00000441105 947 ntBASIC14.68□□□□□ -0.06
TUBP50607 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.68□□□□□ -0.06
TUBP50607 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.68□□□□□ -0.06
TUBP50607 AC095040.1-201ENST00000513286 675 ntBASIC14.68□□□□□ -0.06
TUBP50607 RNA5SP417-201ENST00000516459 108 ntBASIC14.68□□□□□ -0.06
TUBP50607 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.68□□□□□ -0.06
TUBP50607 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBP50607 AP005264.5-201ENST00000590066 467 ntBASIC14.68□□□□□ -0.06
TUBP50607 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.68□□□□□ -0.06
TUBP50607 AC140113.1-201ENST00000603467 169 ntBASIC14.68□□□□□ -0.06
TUBP50607 RN7SL736P-201ENST00000613111 269 ntBASIC14.68□□□□□ -0.06
TUBP50607 MIR7845-201ENST00000618396 99 ntBASIC14.68□□□□□ -0.06
TUBP50607 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TUBP50607 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TUBP50607 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TUBP50607 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.68□□□□□ -0.06
TUBP50607 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBP50607 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TUBP50607 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.67□□□□□ -0.06
TUBP50607 AC092978.1-202ENST00000637590 1327 ntBASIC14.67□□□□□ -0.06
TUBP50607 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBP50607 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TUBP50607 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TUBP50607 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TUBP50607 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.67□□□□□ -0.06
TUBP50607 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms