Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 AC136604.1-202ENST00000425471 771 ntBASIC12.91□□□□□ -0.34
HTR3AP46098 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HTR3AP46098 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.91□□□□□ -0.34
HTR3AP46098 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR3AP46098 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR3AP46098 AC093752.3-201ENST00000567343 901 ntBASIC12.91□□□□□ -0.34
HTR3AP46098 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.91□□□□□ -0.34
HTR3AP46098 MIR3615-201ENST00000581999 87 ntBASIC12.91□□□□□ -0.34
HTR3AP46098 AC026740.1-201ENST00000607068 791 ntBASIC12.91□□□□□ -0.34
HTR3AP46098 AC244452.3-201ENST00000636814 210 ntBASIC12.91□□□□□ -0.34
HTR3AP46098 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR3AP46098 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HTR3AP46098 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HTR3AP46098 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HTR3AP46098 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
HTR3AP46098 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 Z98257.2-202ENST00000641138 1548 ntBASIC12.9□□□□□ -0.34
HTR3AP46098 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HTR3AP46098 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.9□□□□□ -0.34
HTR3AP46098 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.9□□□□□ -0.34
HTR3AP46098 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.9□□□□□ -0.34
HTR3AP46098 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HTR3AP46098 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HTR3AP46098 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 AL022334.2-201ENST00000610000 484 ntBASIC12.9□□□□□ -0.34
HTR3AP46098 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 MIR6869-201ENST00000619434 62 ntBASIC12.9□□□□□ -0.34
HTR3AP46098 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.9□□□□□ -0.34
HTR3AP46098 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HTR3AP46098 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HTR3AP46098 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.9□□□□□ -0.35
HTR3AP46098 AL139158.3-201ENST00000641212 1562 ntBASIC12.9□□□□□ -0.35
HTR3AP46098 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HTR3AP46098 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms