Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL15A1P39059 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
COL15A1P39059 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
COL15A1P39059 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.25■□□□□ 0.35
COL15A1P39059 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COL15A1P39059 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC17.25■□□□□ 0.35
COL15A1P39059 AC011477.7-201ENST00000617163 1440 ntBASIC17.25■□□□□ 0.35
COL15A1P39059 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 AL121949.3-201ENST00000406684 385 ntBASIC17.25■□□□□ 0.35
COL15A1P39059 AL359092.2-201ENST00000423330 585 ntBASIC17.25■□□□□ 0.35
COL15A1P39059 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC17.25■□□□□ 0.35
COL15A1P39059 HLA-W-207ENST00000439514 771 ntBASIC17.25■□□□□ 0.35
COL15A1P39059 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC17.25■□□□□ 0.35
COL15A1P39059 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.25■□□□□ 0.35
COL15A1P39059 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC17.25■□□□□ 0.35
COL15A1P39059 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 AC020763.3-201ENST00000625095 2904 ntBASIC17.25■□□□□ 0.35
COL15A1P39059 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.25■□□□□ 0.35
COL15A1P39059 AC020917.4-201ENST00000623994 1999 ntBASIC17.25■□□□□ 0.35
COL15A1P39059 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL15A1P39059 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
COL15A1P39059 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COL15A1P39059 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC17.24■□□□□ 0.35
COL15A1P39059 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 AHCYP3-201ENST00000420053 1279 ntBASIC17.24■□□□□ 0.35
COL15A1P39059 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 SNORA47-201ENST00000458862 138 ntBASIC17.24■□□□□ 0.35
COL15A1P39059 AC008494.1-201ENST00000497612 796 ntBASIC17.24■□□□□ 0.35
COL15A1P39059 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17.24■□□□□ 0.35
COL15A1P39059 SAA2-206ENST00000530400 323 ntTSL 3 BASIC17.24■□□□□ 0.35
COL15A1P39059 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC17.24■□□□□ 0.35
COL15A1P39059 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC17.24■□□□□ 0.35
COL15A1P39059 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC17.24■□□□□ 0.35
COL15A1P39059 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC17.24■□□□□ 0.35
COL15A1P39059 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COL15A1P39059 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
COL15A1P39059 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.24■□□□□ 0.35
COL15A1P39059 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC17.24■□□□□ 0.35
COL15A1P39059 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL15A1P39059 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL15A1P39059 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms