Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.2□□□□□ -0.14
FDFT1P37268 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.2□□□□□ -0.14
FDFT1P37268 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 AC138649.2-201ENST00000615886 705 ntBASIC14.2□□□□□ -0.14
FDFT1P37268 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FDFT1P37268 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 NRADDP-202ENST00000641269 1585 ntBASIC14.2□□□□□ -0.14
FDFT1P37268 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FDFT1P37268 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FDFT1P37268 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.2□□□□□ -0.14
FDFT1P37268 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 AC245140.2-201ENST00000624054 1939 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 POM121L14P-201ENST00000406100 1558 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 CYP46A4P-201ENST00000414953 267 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.19□□□□□ -0.14
FDFT1P37268 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
FDFT1P37268 MIR3940-201ENST00000579148 102 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 AL645939.5-201ENST00000606834 243 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 AL451050.2-201ENST00000606967 682 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 AL022328.3-201ENST00000607943 679 ntBASIC14.19□□□□□ -0.14
FDFT1P37268 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
FDFT1P37268 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.19□□□□□ -0.14
FDFT1P37268 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.19□□□□□ -0.14
FDFT1P37268 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.19□□□□□ -0.14
FDFT1P37268 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FDFT1P37268 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FDFT1P37268 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
FDFT1P37268 AL157791.1-201ENST00000553667 1699 ntBASIC14.18□□□□□ -0.14
FDFT1P37268 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.18□□□□□ -0.14
FDFT1P37268 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms