Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 AL139158.3-201ENST00000641212 1562 ntBASIC10.9□□□□□ -0.66
CD28P10747 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 AC097359.2-201ENST00000604992 2389 ntBASIC10.9□□□□□ -0.66
CD28P10747 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 SHMT1P1-201ENST00000419974 1312 ntBASIC10.9□□□□□ -0.66
CD28P10747 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 AC004554.1-201ENST00000422830 1468 ntBASIC10.9□□□□□ -0.66
CD28P10747 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CD28P10747 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC10.9□□□□□ -0.66
CD28P10747 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 RPL3P2-204ENST00000413027 1203 ntBASIC10.9□□□□□ -0.66
CD28P10747 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.9□□□□□ -0.66
CD28P10747 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC10.9□□□□□ -0.66
CD28P10747 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 PRSS3P1-201ENST00000503996 742 ntBASIC10.9□□□□□ -0.66
CD28P10747 AC100858.1-201ENST00000514059 1228 ntBASIC10.9□□□□□ -0.66
CD28P10747 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 AL132994.1-201ENST00000554098 400 ntBASIC10.9□□□□□ -0.66
CD28P10747 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 AC141586.1-203ENST00000567242 366 ntBASIC10.9□□□□□ -0.66
CD28P10747 AC132825.4-202ENST00000578792 434 ntBASIC10.9□□□□□ -0.66
CD28P10747 AC011247.3-201ENST00000603297 438 ntBASIC10.9□□□□□ -0.66
CD28P10747 FO393412.1-201ENST00000619841 382 ntBASIC10.9□□□□□ -0.66
CD28P10747 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.9□□□□□ -0.66
CD28P10747 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CD28P10747 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CD28P10747 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.9□□□□□ -0.67
CD28P10747 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CD28P10747 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CD28P10747 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CD28P10747 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
CD28P10747 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.9□□□□□ -0.67
CD28P10747 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC10.89□□□□□ -0.67
CD28P10747 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CD28P10747 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CD28P10747 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CD28P10747 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms