Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.52□□□□□ -0.09
RB1P06400 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.52□□□□□ -0.09
RB1P06400 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RB1P06400 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.52□□□□□ -0.09
RB1P06400 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.52□□□□□ -0.09
RB1P06400 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC14.52□□□□□ -0.09
RB1P06400 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 AC004466.2-201ENST00000614749 516 ntBASIC14.52□□□□□ -0.09
RB1P06400 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC14.52□□□□□ -0.09
RB1P06400 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
RB1P06400 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RB1P06400 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RB1P06400 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.51□□□□□ -0.09
RB1P06400 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.51□□□□□ -0.09
RB1P06400 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC14.51□□□□□ -0.09
RB1P06400 YY1P2-201ENST00000438766 948 ntBASIC14.51□□□□□ -0.09
RB1P06400 AL356000.1-201ENST00000441073 1238 ntBASIC14.51□□□□□ -0.09
RB1P06400 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.51□□□□□ -0.09
RB1P06400 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC14.51□□□□□ -0.09
RB1P06400 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 RPL29P2-202ENST00000498671 657 ntBASIC14.51□□□□□ -0.09
RB1P06400 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 AC233724.9-201ENST00000511694 407 ntBASIC14.51□□□□□ -0.09
RB1P06400 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.51□□□□□ -0.09
RB1P06400 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.51□□□□□ -0.09
RB1P06400 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 CCND3P2-201ENST00000579393 537 ntBASIC14.51□□□□□ -0.09
RB1P06400 ACTBP9-201ENST00000587663 1099 ntBASIC14.51□□□□□ -0.09
RB1P06400 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RB1P06400 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
RB1P06400 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.51□□□□□ -0.09
RB1P06400 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RB1P06400 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.51□□□□□ -0.09
RB1P06400 AC245140.2-201ENST00000624054 1939 ntBASIC14.51□□□□□ -0.09
RB1P06400 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC14.5□□□□□ -0.09
RB1P06400 AC011477.7-201ENST00000617163 1440 ntBASIC14.5□□□□□ -0.09
RB1P06400 AC089987.1-201ENST00000551654 2209 ntBASIC14.5□□□□□ -0.09
RB1P06400 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.5□□□□□ -0.09
RB1P06400 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RB1P06400 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms