Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 AC004554.1-201ENST00000422830 1468 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 AL805961.2-201ENST00000642139 4817 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 AC074138.1-201ENST00000611182 1303 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CNOT4O95628 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.46□□□□□ -0.41
CNOT4O95628 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 AC079112.1-201ENST00000454972 939 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 AC005740.1-201ENST00000515639 522 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CNOT4O95628 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
CNOT4O95628 SIGLEC22P-201ENST00000599104 714 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.46□□□□□ -0.41
CNOT4O95628 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CNOT4O95628 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.46□□□□□ -0.41
CNOT4O95628 AC016397.2-201ENST00000624848 1985 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 AC012617.1-204ENST00000586340 2305 ntBASIC12.46□□□□□ -0.41
CNOT4O95628 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CNOT4O95628 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CNOT4O95628 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
CNOT4O95628 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CNOT4O95628 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CNOT4O95628 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 AL139158.3-201ENST00000641212 1562 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 AP000356.3-201ENST00000382243 753 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 AL512306.1-201ENST00000432698 848 ntBASIC12.45□□□□□ -0.42
CNOT4O95628 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CNOT4O95628 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CNOT4O95628 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.45□□□□□ -0.42
CNOT4O95628 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms