Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 LINC01815-202ENST00000641468 1409 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AHCYP4-201ENST00000419201 1315 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 SCARNA21-201ENST00000517026 139 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AC023310.1-201ENST00000554836 735 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AC244157.2-201ENST00000616239 1006 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 AC008687.7-202ENST00000637404 953 ntBASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.48□□□□□ -0.41
COPS3Q9UNS2 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AC099521.2-201ENST00000619354 2036 ntBASIC12.47□□□□□ -0.41
COPS3Q9UNS2 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 GHET1-201ENST00000627071 1906 ntBASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CICP1-201ENST00000416803 2410 ntBASIC12.47□□□□□ -0.41
COPS3Q9UNS2 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.47□□□□□ -0.41
COPS3Q9UNS2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 GOLGA2P8-201ENST00000505201 779 ntBASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 AC093462.1-201ENST00000621167 1683 ntBASIC12.47□□□□□ -0.41
COPS3Q9UNS2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COPS3Q9UNS2 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
COPS3Q9UNS2 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms