Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC015909.5-201ENST00000624336 2266 ntBASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AL807761.2-201ENST00000422849 729 ntBASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 IGLV3-15-201ENST00000518356 244 ntBASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 KLF17P1-201ENST00000547105 1126 ntBASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CUEDC1Q9NWM3 FMO6P-201ENST00000236166 1620 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 KATNBL1P2-201ENST00000433311 835 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 FGFR3P1-201ENST00000449999 601 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 CEP164P1-201ENST00000455142 418 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AC095040.1-201ENST00000513286 675 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SIGLEC18P-201ENST00000602271 909 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 MIR6756-201ENST00000616240 63 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AP001065.2-201ENST00000617205 644 ntBASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms