Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC100827.2-201ENST00000563214 1194 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC244157.2-201ENST00000616239 1006 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC133540.1-201ENST00000620845 1019 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AL162426.1-201ENST00000624141 743 ntBASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AMBRA1Q9C0C7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 ELK2AP-201ENST00000392510 1007 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AC003958.1-201ENST00000435883 421 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 FAM58BP-201ENST00000439056 645 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 MTX1P1-201ENST00000440904 838 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 HSPB1P2-201ENST00000448722 546 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 RPSAP36-202ENST00000494591 1261 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 MIR4741-201ENST00000579822 90 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 RN7SL190P-201ENST00000582519 257 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AP002353.1-201ENST00000528257 1599 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 AC012531.1-201ENST00000562848 2680 ntBASIC13.06□□□□□ -0.32
AMBRA1Q9C0C7 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AMBRA1Q9C0C7 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms