Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 LINC00265-2P-201ENST00000413372 782 ntBASIC15.37■□□□□ 0.05
TRIM6Q9C030 AC092638.2-201ENST00000441105 947 ntBASIC15.37■□□□□ 0.05
TRIM6Q9C030 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 GRPEL2P1-201ENST00000453145 339 ntBASIC15.37■□□□□ 0.05
TRIM6Q9C030 AC018463.1-201ENST00000456674 917 ntBASIC15.37■□□□□ 0.05
TRIM6Q9C030 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM6Q9C030 AL359881.3-201ENST00000602640 1721 ntBASIC15.37■□□□□ 0.05
TRIM6Q9C030 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRIM6Q9C030 AC131902.2-201ENST00000566892 2172 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CICP16-201ENST00000502609 2813 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 KRT8P18-201ENST00000413425 1445 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC004554.1-201ENST00000422830 1468 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC095040.1-201ENST00000513286 675 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CR383656.3-201ENST00000551315 183 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 RN7SL455P-201ENST00000580629 282 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 MIR4649-201ENST00000582839 64 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 MIR6727-201ENST00000620702 65 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 HSPA7-201ENST00000445535 1927 ntBASIC15.36■□□□□ 0.05
TRIM6Q9C030 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM6Q9C030 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM6Q9C030 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM6Q9C030 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM6Q9C030 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM6Q9C030 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM6Q9C030 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM6Q9C030 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms