Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 RNA5SP486-201ENST00000515961 83 ntBASIC11.34□□□□□ -0.59
RAB40CQ96S21 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ECM1P1-201ENST00000604092 1279 ntBASIC11.34□□□□□ -0.59
RAB40CQ96S21 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.33□□□□□ -0.59
RAB40CQ96S21 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RAB40CQ96S21 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AL645937.6-201ENST00000641122 3727 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 MSTO2P-201ENST00000314835 1709 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AP006294.1-201ENST00000415407 339 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AL645933.1-201ENST00000440087 609 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AP003171.2-201ENST00000528208 925 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 WASH4P-201ENST00000564273 1246 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 RN7SL713P-201ENST00000582127 302 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 MIR3197-201ENST00000582241 73 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AL136301.1-201ENST00000615830 422 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AC145098.2-201ENST00000623593 3026 ntBASIC11.33□□□□□ -0.6
RAB40CQ96S21 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RAB40CQ96S21 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
RAB40CQ96S21 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RAB40CQ96S21 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RAB40CQ96S21 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms