Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 TLE2-205ENST00000586422 389 ntTSL 5 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 BOLA3P2-201ENST00000586496 323 ntBASIC16.46■□□□□ 0.23
SNED1Q8TER0 AC112220.4-201ENST00000604982 1263 ntBASIC16.46■□□□□ 0.23
SNED1Q8TER0 Z82244.1-201ENST00000631502 840 ntBASIC16.46■□□□□ 0.23
SNED1Q8TER0 Z82244.2-201ENST00000632196 448 ntBASIC16.46■□□□□ 0.23
SNED1Q8TER0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNED1Q8TER0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.46■□□□□ 0.23
SNED1Q8TER0 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SNED1Q8TER0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNED1Q8TER0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 SNORD88B-201ENST00000408454 91 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 TPST2P1-201ENST00000564073 1102 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 ATF4P4-201ENST00000393544 1930 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 DDC-212ENST00000615193 1674 ntTSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AC020763.3-201ENST00000625095 2904 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AL928654.5-201ENST00000624831 2501 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 SNORA30.1-201ENST00000363193 129 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 SNORA50C-201ENST00000408535 133 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNED1Q8TER0 ACTG1P23-201ENST00000437653 1074 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 HNRNPA1P3-201ENST00000440968 551 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 SLC25A15P1-201ENST00000456738 342 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNED1Q8TER0 AL450487.2-201ENST00000615934 407 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 SNORA50.1-201ENST00000628590 135 ntBASIC16.45■□□□□ 0.22
SNED1Q8TER0 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC16.44■□□□□ 0.22
SNED1Q8TER0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.44■□□□□ 0.22
SNED1Q8TER0 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.44■□□□□ 0.22
SNED1Q8TER0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SNED1Q8TER0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNED1Q8TER0 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms